Publications

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Petegrosso, Raphael; Park, Sunho; Hwang, Tae Hyun; Kuang, Rui (2016): Transfer Learning across Ontologies for Phenome-Genome Association Prediction . In: Bioinformatics, pp. btw649, 2016. (Type: Journal Article | Abstract | Links | Tags: Phenome-genome Association, Semi-supervised Learning, Transfer Learning)
Xie, MaoQiang; Xu, YingJie; Zhang, YaoGong; Hwang, TaeHyun; Kuang, Rui (2015): Network-based Phenome-Genome Association Prediction by Bi-Random Walk . In: PloS one, 10 (5), pp. e0125138, 2015. (Type: Journal Article | Abstract | Links | Tags: Phenome-genome Association, Semi-supervised Learning)
Hwang, TaeHyun; Atluri, Gowtham; Xie, MaoQiang; Dey, Sanjoy; Hong, Changjin; Kumar, Vipin; Kuang, Rui (2012): Co-clustering phenome--genome for phenotype classification and disease gene discovery . In: Nucleic acids research, 40 (19), pp. e146–e146, 2012. (Type: Journal Article | Abstract | Links | Tags: Co-clustering, Network-based Learning, Phenome-genome Association, Semi-supervised Learning)
Xie, Maoqiang; Hwang, Taehyun; Kuang, Rui (2012): Prioritizing disease genes by bi-random walk . In: Pacific-Asia Conference on Knowledge Discovery and Data Mining, pp. 292–303, Springer 2012. (Type: Inproceedings | Abstract | Links | Tags: Phenome-genome Association, Semi-supervised Learning)
Hwang, TaeHyun; Zhang, Wei; Xie, Maoqiang; Liu, Jinfeng; Kuang, Rui (2011): Inferring disease and gene set associations with rank coherence in networks . In: Bioinformatics, 27 (19), pp. 2692–2699, 2011. (Type: Journal Article | Abstract | Links | Tags: Phenome-genome Association, Semi-supervised Learning)
Hwang, TaeHyun; Kuang, Rui (2010): A Heterogeneous Label Propagation Algorithm for Disease Gene Discovery . In: Society for Industrial and Applied Mathematics. Proceedings of the SIAM International Conference on Data Mining, pp. 583, Society for Industrial and Applied Mathematics 2010. (Type: Inproceedings | Abstract | Links | Tags: Phenome-genome Association, Semi-supervised Learning)